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Calcium-Activated Potassium (BK) Channels Are Encoded by Duplicate slo1 Genes in Teleost Fishes

机译:钙激活钾(BK)通道由硬骨鱼中重复的slo1基因编码。

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摘要

Calcium-activated, large conductance potassium (BK) channels in tetrapods are encoded by a single slo1 gene, which undergoes extensive alternative splicing. Alternative splicing generates a high level of functional diversity in BK channels that contributes to the wide range of frequencies electrically tuned by the inner ear hair cells of many tetrapods. To date, the role of BK channels in hearing among teleost fishes has not been investigated at the molecular level, although teleosts account for approximately half of all extant vertebrate species. We identified slo1 genes in teleost and nonteleost fishes using polymerase chain reaction and genetic sequence databases. In contrast to tetrapods, all teleosts examined were found to express duplicate slo1 genes in the central nervous system, whereas nonteleosts that diverged prior to the teleost whole-genome duplication event express a single slo1 gene. Phylogenetic analyses further revealed that whereas other slo1 duplicates were the result of a single duplication event, an independent duplication occurred in a basal teleost (Anguilla rostrata) following the slo1 duplication in teleosts. A third, independent slo1 duplication (autotetraploidization) occurred in salmonids. Comparison of teleost slo1 genomic sequences to their tetrapod orthologue revealed a reduced number of alternative splice sites in both slo1 co-orthologues. For the teleost Porichthys notatus, a focal study species that vocalizes with maximal spectral energy in the range electrically tuned by BK channels in the inner ear, peripheral tissues show the expression of either one (e.g., vocal muscle) or both (e.g., inner ear) slo1 paralogues with important implications for both auditory and vocal physiology. Additional loss of expression of one slo1 paralogue in nonneural tissues in P. notatus suggests that slo1 duplicates were retained via subfunctionalization. Together, the results predict that teleost fish achieve a diversity of BK channel subfunction via gene duplication, rather than increased alternative splicing as witnessed for the tetrapod and invertebrate orthologue.
机译:四脚架中的钙激活大电导钾(BK)通道由单个slo1基因编码,该基因经历了广泛的选择性剪接。选择性剪接会在BK通道中产生高水平的功能多样性,这有助于由许多四足动物的内耳毛细胞电调谐的频率范围很广。迄今为止,虽然硬骨鱼约占所有现存脊椎动物的一半,但尚未在分子水平上研究过硬骨鱼在BK通道在听力中的作用。我们使用聚合酶链反应和遗传序列数据库在硬骨鱼和非硬骨鱼中鉴定了slo1基因。与四足动物相反,所有接受检查的硬骨鱼均在中枢神经系统中表达重复的slo1基因,而在硬骨鱼全基因组复制事件之前发生分化的非硬骨鱼仅表达一个slo1基因。系统发育分析进一步表明,尽管其他slo1重复是单个重复事件的结果,但在硬骨鱼中slo1重复之后,基底硬骨鱼(Anguilla rostrata)发生了独立的重复。第三个独立的slo1重复(自体四倍体化)发生在鲑鱼中。硬骨鱼slo1基因组序列与其四足动物直向同源物的比较表明,在两个slo1同源同源物中,替代剪接位点的数量均减少。对于硬骨鱼类Porichthys notatus,这是一个重点研究物种,其发声的最大光谱能量处于通过内耳中BK通道电调谐的范围内,外周组织显示一种(例如,声带肌肉)或两者(例如,内耳)的表达slo1旁听对听觉和声音生理都有重要影响。在notatus的非神经组织中一个slo1旁系同源物的表达进一步丧失,表明slo1重复序列通过亚功能化得以保留。总之,结果预测硬骨鱼可通过基因复制实现多种BK通道亚功能,而不是像四足动物和无脊椎动物直系同源物那样增加选择性剪接。

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